Schrödinger Advanced Computer-Aided Drug Design Course
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Schrödinger Advanced Computer-Aided Drug Design Course

FREE International Workshop on
“Advanced Computer-Aided Drug Design”
Schrödinger Online Short Course

Schrödinger in association with Biotecnika Presents an exclusive opportunity to gain in-depth knowledge about one of the most trending topics in Bioscience –  Schrödinger Advanced Computer-Aided Drug Design Course.

About the Training Course: Computer-aided drug design (CADD) is a vital component of modern drug discovery programs that utilizes computational approaches to identify, develop and optimize bioactive compounds for the development of drugs.

Schrödinger’s online webinar series on CADD in intended to engage researchers who want to understand the use of computational molecular modeling in the context of rational and robust drug design. In this course, the participants will get to learn the background and the applications of molecular simulations through Schrödinger’s state-of-the-art Small Molecular Drug Discovery (SMDD) Suite.

The training course is split into 10 different sessions. Each of these sessions will have approximately 45 mins of a presentation along with a demonstration on how to create the models, run simulations, perform analysis and make predictions. All modules will end with a 15 minutes Q&A session with Schrödinger’s Scientists.

At the end of the course, we expect the participants to be familiar with the basic principles of CADD. Additionally, with the successful completion of the course, the participants will be eligible for follow-up hands-on workshops conducted periodically at different locations across India.

Webinar Details:

  • Date: July 22 to August 2nd
  • Time: 7 PM – 8 PM IST
  • Duration: One-hour session each day (Mon – Fri)
  • Total number of Days: 10 days workshop

Results of The Schrodinger Workshop Eligibility Test

NOTE:

  • Candidates who have scored above 80% have successfully qualified the test and will get FREE Hard Copy certificates.
  • Candidates who have scored above 70% also have successfully qualified the test and will receive FREE e-copy of the certificates.
  • Candidates who have scored less than 70% Score will also get a chance to attend the workshop so that they can sharpen their knowledge further. In order to get certificates candidates will have to pay a nominal fee of Rs 299/-.

Details on how to attend the workshop will be shared to you on your registered mail ID.

First NameLast NameScore
HARSHVARDHAN100
bhawnabhardwaj100
PoojaDevi100
UtkarshaSalvi100
ashishbatra100
DayanedeoSumbre100
RaghavendranL100
NAGENDARREDDY VEREDDY100
meenaseth100
MohdAasif100
ShubhamKumar Gaur100
PRIYALBAGWE100
PritamBagwe100
NANCYTANEJA100
PoojaGahlawat100
KiranLokhande100
SrinivasanM R100
ishwarchandra95
KiranKumar95
NavyaK Debbad95
ShekinahGlory95
GeorrgeJohn J95
AkashShivhare95
DipaliAtole95
GeetikRajput95
HiraLahane95
RoylanPais95
AnandPardesi95
AYUSHITIWARI95
NavjotKaur95
SupriyaPradhan95
chinmayeechoudhury95
PARULSHARMA95
ABISHEKM95
PreetiSaini95
SurenderSingh95
AKSHAYAM V95
MUHAMMEDFAYAD A95
SayaliDoiphode95
ManjuKumari95
ANKITSINGH90
LALITMOHAN Nainwal90
Gehnaluthra90
PoonamDogra90
AwantikaShrivastava90
PramodKumar90
shivaprasad sriramadasu90
TejPrakash Mantri90
SaniyaShakir90
AnoopJohny90
PriyankaYolmo90
KhushbooMaurya90
DeblinaDas90
shamaG bhat90
VIDISHAK90
AshasmitaMishra90
NimishaMavlankar90
Dondapatisnehitha90
NikitaKamatkar90
ParnikaPathak90
KalyaniMeha90
NatashaJAISWAL90
AishwaryaDeshpande90
JesuCastin90
ArvindChhabra90
ShrutiGurbaxani90
ShubhamRoy90
PramilaaKumar90
SteffiFrancis90
AnuradhaSingh90
VL NARASIMHA RAO THOTA90
saraswathipillai90
ROHIT90
KrishnanandNagarajan90
Sathishkumar Marimuthu90
PRATEEKPANDYA85
DonaMukherjee85
GargiMittal85
AaishaKhan85
DebarchanPanda85
ParthPrajapati85
gehna85
VaishaliKaushik85
KirtikaMadan85
NagavamsidharM85
NachiketDandekar85
BhaskarGanguly85
ManoharDange85
jaykishansolanki85
KalyanK85
KalaivaniMadhavan85
GayathriDabbeeru85
NabarupaGupta85
sandeepshekhawat85
AmanKumar Mahto85
ShehnazFatima85
PriyankaShelke85
PJanhavi85
ANITAKUMARI85
karthicksudarsha85
chinmayeechoudhury85
KEDARSHARMA85
SunnyMukherjee85
DeepakGulwani85
Mrs.Parul S85
DeepabaliGhosal85
sonukumar85
NavjotKaur85
AbhilashaSharma85
ManabeshNath85
PremanandA85
SahabuddinAhmed85
JennyJacob80
ArpitaDutta Das80
Pillakiran kumar reddy80
DEEPANJALIKUSHWAHA80
NEHAGUPTA80
DipaliKosey80
HetaVasani80
TIASHAGHOSH80
PushtiDarbar80
MohdAzeem80
SonalSharma80
sumansaurav80
lachiwankhede80
KAYALVIZHI80
VarshaSarode80
Vijay80
AparnaPanicker80
REVATHYNANDAKUMAR80
VasanthaKumar G80
DharaPatel80
KIRANKUMAR BABBUR80
VikramSingh80
shakirali80
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RAMESHNARAYANA70
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EhrazAnis70
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PawanKumar Pandey70
PayalNashier70
KavithaRaj V70
KapilJain70
NILANJANGHOSH DASTIDAR70
shashankviswanathan70
HaifaParkar70
DIVIJASRIVASTAVA70
SemantiGhosh70
SounakChakraborty70
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NarayananM A70
NeetuAgrawal70
GunjanSharma70
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VenkatasaiRahul Dogiparthi70
ANJALIGAUR70
LakshmiSadhana S70
DivyaDharshini Umashankar70
MamadouSANGARE70
DakshataGaikwad70
AnandChintakrindi70
MohammedAmrullah70
ShradhMahendra70
prashantsharma70
VijayalaxmiChavan70
ShaikSalma70
AnkurChaudhuri70
DheepthiJayamurali70
MeenakshiGupta70
ABHISHEKCHOLLI70
SOUMYARANJAN SAHU70
PARIMALAGONDU70
BIKASHKUMAR SINGH70
SonalikaSingh70
HoneyJain70
ShailendraSingh70
AnishRajendran70
KiranGangarapu70
ADITIBIJALWAN70
KAUSHIKBAIDYA70
GayathriElangovan70
KAJALABROL70
sobhithasurepalli70
CheriyanEbenezer70
TanyaBhayana70
SoniyaPanjwani70
PriyaK70
AnkitRoy Choudhury70
ShahabasS70
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NarayanDas70
NikitaGeorge70
KalyaniBindu70
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PruthvirajB70
PrinithKaveramma U P70
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PRATIBHACHAUDHARY65
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SaleemJavid65
SANIYASHAKIR65
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PreyengaRamesh65
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RachanaBhimanwar65
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MEGHABISHT65
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ShradhaMahendra65
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GREESHMAMATHEW65
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juliezinzala65
DhwaniSolanki65
VishvaDarji65
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GMaalavika65
PragatiGangwal65
HarshnadMau65
PrithaGhosh65
VidyaPasalkar65
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SDivyashree65
VeerapandiL65
PRAGYAMISRA65
MONALIMISHRA65
BHUVANSOUROUT65
NivethaR65
GokulKrishna S65
DEBANJANMITRA65
ShrutikaKota65
SATTIANNAPURNA65
AMITMITRA65
PriyankaIyengar K65
BrateenDatta65
RATHIJITMALLICK65
NasireenShaik65
ROHITBANSAL65
SabbirAhmed Laskar65
SajeedShaikh65
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AnwarAhmed65
NavyaKausalya Debbad65
INDUSHARMA65
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B.Preetham Kumar65
MedagamTejaswini Reddy65
B.Preetham Kumar65
B.Preetham Kumar65
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Dr.SwapnaVadlamani65
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See Also
AcSIR Dr. APJ Abdul Kalam Summer Training Program 2020

 

Name of the Scientist: Dr. Prajwal Nandekar

Profile: Dr. Prajwal Nandekar received his Ph.D. from the National Institute of Pharmaceutical Education and Research (NIPER – Mohali) in 2015. He is a recipient of the prestigious DAAD fellowship. He has four years of postdoctoral research experience in using various types of molecular modeling techniques to understand biological processes. His research interests are computer-aided drug design, quantum chemistry, and multi‑scale molecular dynamics simulations. He has been associated with many eminent scientists and has experience on a diverse range of research projects and proteins/DNA as drug targets. He holds 26 publications to his credit.

Who Can Participate: Scientists/Research Scholars/Academicians can participate.

Eligibility: we expect the participants to be familiar with the basic principles of CADD.

Advantage of taking Schrödinger’s online course:

  • This course will provide knowledge on various computational methods and its practical applications in the Pharma R & D.
  • Introduction to Molecular Modeling in Drug Discovery will show how industry-leading computational molecular modeling tools are used to aid in drug discovery.
  • In this course, the participants will get to learn the state-of-the-art Schrödinger’s Small molecular drug discovery suite.
  • Participants will learn how to design a CADD project and how to incorporate these tools into their research projects.
  • Participants will have a chance to expand their skills set in molecular modeling for professional experience. It can also be used as extra credits in Academia and highlighting points in their CV.
  • This course will provide practical applications of molecular modeling using active learning strategies and multiple types of content.
  • Specifically, Basics of computer-aided drug design, Introduction to the state-of-art Schrodinger suite for drug design, Approaches in Target selection, Molecular docking, Virtual screening, HITS identification, Lead optimization, Structure/Ligand-based drug design, Pharmacophore modeling, 3D QSAR modeling, Combinatorial library designing, De-novo drug design, etc.
See Also
World Resources Institute Research Intern Recruitment 2019

What do you get on Attending this workshop?

With the successful completion of the course, the participants will be eligible for Hard copy of the certificate

Course schedule:

Day 1: Introduction to Computational Drug Design

✓ Introduction to Computational Drug Design
✓ Introduction to various methods of Computational Drug Design
✓ Questions and Answers

Day 2: Protein-ligand Interactions

✓ Bring Proteins and ligand complex into Modelling Microscope
✓ Preparation of protein structure to optimize interaction networks
✓ Binding site properties and hotspots identification
✓ Questions and Answers

Day 3: Model Protein-ligand Poses in Hit Identification and Optimization

✓ Find New Protein-ligand Poses with Molecular Docking
✓ Qualitative and Quantitative analysis of docking results
✓ HIT identification
✓ Questions and Answers

Day 4: Extra Precision Docking and Advanced Analysis

✓ Extra precision molecular docking
✓ Advanced analysis using XP visualizer
✓ HIT identification and selection
✓ Questions and Answers

Day 5: Predicting Protein flexibility upon ligand binding

✓ Introduction to Flexible docking
✓ Induced Fit Docking protocol
✓ Analysis of docking results
✓ Questions and Answers

Day 6: Virtually Screen Large Compound Libraries in Preparation for SAR

✓ Ligand-based drug design Background
✓ Pharmacophore mapping
✓ High-throughput Ligand-based Virtual Screens
✓ Questions and Answers

See Also
AcSIR Dr. APJ Abdul Kalam Summer Training Program 2020

Day 7: Combine Modeling and Experimental Data for SAR Development

✓ Use QSAR Models to Understand Structure-Activity Relationship
✓ 3D-QSAR model generation and evaluation
✓ Prediction of activity for newly designed compounds
✓ Questions and Answers

Day 8: Ideate New Compounds Based on Modeling and SAR Understanding

✓ Molecular databases in drug discovery
✓ Lead optimization
✓ Questions and Answers

Day 9: De-novo molecular design

✓ Library enumeration
✓ Reaction pathway enumeration
✓ Bioisosteric modifications
✓ Calculation of physiochemical properties and ADMET profiling

Day 10: Case Study in Molecular Modeling – cJNK protein

✓ Background on Kinase Structure and Activity
✓ Case Study: c-Jun N-Terminal Kinase (JNK) Inhibitors
✓ Question and Answers

About Schrödinger:

Schrödinger develops state of the art molecular modeling and simulation software for use in pharmaceutical, biotechnology, and materials science research. The company’s mission is to improve human health and quality of life through development, distribution, and application of advanced computational methods that transform the way scientists design therapeutics and materials. In India, Schrödinger is used in top Pharma R&D labs and over 200 Academic research institutions and university.

Schrödinger provides five software suites: PyMOL, Biologics, Small Molecule Drug Discovery, Materials Science and Discovery Informatics.

Schrödinger Advanced Computer-Aided Drug Design Course

Small Molecule Drug Discovery Suite with products ranging from QSAR to virtual screening to binding affinity prediction. It is a comprehensive package that contains all the tools necessary for fragment-, ligand-, and structure-based drug design for lead discovery and optimization. Some of the unique features include a wide range of virtual screening options, the rank ordering of compounds with the use of Free energy perturbation, Prime MM/GBSA and WaterMap/MM and QM-polarized ligand docking, great target preparation and modeling options and a very powerful and robust visualizer.

Materials Science Suite comprises of a diverse set of tools for computing the structure, reactivity, and properties of chemical systems. The package offers applications to facilitate all steps in a chemical simulation from structure generation and model creation through simulation and property prediction to data analysis and decision making. Schrödinger’s MS Suite exploits atomic scale simulation that can accelerate the development process by providing understanding, helping to reveal the most promising structures and compositions, and indicating those pathways least likely to succeed. The Suite includes specialized builders for systems including Organometallic complexes; Polymers, dendrimers, thermosets, and networked materials; Nanostructures and nanoparticles; Crystal structures, periodic slabs and interfaces, and Disordered systems. Additionally, the automated workflows for properties including like Optoelectronics, Electrochemistry, Thermophysical properties, Mechanical properties, Reactivity and stability, Structure, dynamics, and energetics makes the suite one of it’s kind in the field.

Biologics suite is designed from the ground up to be the first complete collection of all the tools that are important in modeling biologics, antibodies, and proteins. BioLuminate is a comprehensive modeling package for biologics, with advanced simulation methods deployed through an intuitive user interface that is specifically designed for biologics. BioLuminate is the first comprehensive integrated modeling package to specifically address the key questions associated with the molecular design of biologics. BioLuminate provides access to tools for protein engineering, residue/alanine scanning, analysis of protein-protein interfaces, antibody modeling, protein aggregation prediction, identification of reactive hotspots (proteolysis, glycosylation, deamidation, and oxidation), and more.

PyMOL is a user-sponsored molecular visualization system on an open-source foundation.

Discovery Informatics Suite allows multi-disciplinary teams, including chemists, modelers, and IT professionals, to share, view, and manage data in real time.

* For any details pertaining to Schrödinger Advanced Computer-Aided Drug Design Course by Biotecnika – please reach out to us @ 1800-1200-1818.

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Shekhar Suman is the CEO & Managing Director of BioTecNika Info Labs Pvt Ltd, An avid reader who is passionate about Bio Sciences and has gifted us BioTecNika

7 COMMENTS

  1. First of all its a nice initiative taken by the organization to acknowledge the on going artificial intelligence development on Drug and Development.
    Do i have to buy these software mentioned above or i can get it through sites.
    Please let me know.
    Thabk a lot.

  2. Really good initiative. When will the examination be conducted? Do we need to have some special softwares to see some data files?

  3. We want to know about the online exam for free workshop..
    Plz mentioned the related topic..
    Its gonna very helpful for us..

Comments are closed.